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Cluster: HRGMv2_0863_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0863_1 HRGMv2_0863_1_98 116529 117929 + GH1
TC HRGMv2_0863_1 HRGMv2_0863_1_99 118050 119402 + 4.A.3.2.9
TC HRGMv2_0863_1 HRGMv2_0863_1_100 119555 119857 + 4.A.3.2.9
TC HRGMv2_0863_1 HRGMv2_0863_1_101 119867 120199 + 4.A.3.2.3
STP HRGMv2_0863_1 HRGMv2_0863_1_102 120441 121394 + Glucokinase
pfam HRGMv2_0863_1 HRGMv2_0863_1_103 121561 122484 + DHH | DHHA2
TC HRGMv2_0863_1 HRGMv2_0863_1_104 122752 124110 + 2.A.33.1.1
Gene ID: HRGMv2_0863_1_98
Type: CAZyme
Location: 116529 - 117929 (+)
Gene ID: HRGMv2_0863_1_99
Type: TC
Location: 118050 - 119402 (+)
Gene ID: HRGMv2_0863_1_100
Type: TC
Location: 119555 - 119857 (+)
Gene ID: HRGMv2_0863_1_101
Type: TC
Location: 119867 - 120199 (+)
Gene ID: HRGMv2_0863_1_102
Type: STP
Location: 120441 - 121394 (+)
Gene ID: HRGMv2_0863_1_103
Type: pfam
Location: 121561 - 122484 (+)
Gene ID: HRGMv2_0863_1_104
Type: TC
Location: 122752 - 124110 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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