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Cluster: HRGMv2_0863_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0863_8 HRGMv2_0863_8_17 17744 18628 - CE7
TC HRGMv2_0863_8 HRGMv2_0863_8_18 18802 19629 - 3.A.1.5.27
TC HRGMv2_0863_8 HRGMv2_0863_8_19 19630 21645 - 3.A.1.5.25
TC HRGMv2_0863_8 HRGMv2_0863_8_20 21649 22605 - 3.A.1.5.38
TC HRGMv2_0863_8 HRGMv2_0863_8_21 22763 24376 - 3.A.1.5.27
pfam HRGMv2_0863_8 HRGMv2_0863_8_22 24742 26682 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0863_8 HRGMv2_0863_8_23 26689 28371 - 2.A.66.4.4
Gene ID: HRGMv2_0863_8_17
Type: CAZyme
Location: 17744 - 18628 (-)
Gene ID: HRGMv2_0863_8_18
Type: TC
Location: 18802 - 19629 (-)
Gene ID: HRGMv2_0863_8_19
Type: TC
Location: 19630 - 21645 (-)
Gene ID: HRGMv2_0863_8_20
Type: TC
Location: 21649 - 22605 (-)
Gene ID: HRGMv2_0863_8_21
Type: TC
Location: 22763 - 24376 (-)
Gene ID: HRGMv2_0863_8_22
Type: pfam
Location: 24742 - 26682 (-)
Gene ID: HRGMv2_0863_8_23
Type: TC
Location: 26689 - 28371 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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