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Cluster: HRGMv2_0862_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0862_14 HRGMv2_0862_14_10 7458 8627 - CE9
STP HRGMv2_0862_14 HRGMv2_0862_14_11 8745 9911 - SIS | SIS
TF HRGMv2_0862_14 HRGMv2_0862_14_12 10026 10757 - GntR
TC HRGMv2_0862_14 HRGMv2_0862_14_13 10943 12025 - 4.A.6.1.4
TC HRGMv2_0862_14 HRGMv2_0862_14_14 12015 12815 - 4.A.6.1.4
TC HRGMv2_0862_14 HRGMv2_0862_14_15 12906 13388 - 4.A.6.1.4
pfam HRGMv2_0862_14 HRGMv2_0862_14_16 13425 13706 - YajC
TC HRGMv2_0862_14 HRGMv2_0862_14_17 13706 14149 - 4.A.6.1.16
Gene ID: HRGMv2_0862_14_10
Type: CAZyme
Location: 7458 - 8627 (-)
Gene ID: HRGMv2_0862_14_11
Type: STP
Location: 8745 - 9911 (-)
Gene ID: HRGMv2_0862_14_12
Type: TF
Location: 10026 - 10757 (-)
Gene ID: HRGMv2_0862_14_13
Type: TC
Location: 10943 - 12025 (-)
Gene ID: HRGMv2_0862_14_14
Type: TC
Location: 12015 - 12815 (-)
Gene ID: HRGMv2_0862_14_15
Type: TC
Location: 12906 - 13388 (-)
Gene ID: HRGMv2_0862_14_16
Type: pfam
Location: 13425 - 13706 (-)
Gene ID: HRGMv2_0862_14_17
Type: TC
Location: 13706 - 14149 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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