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Cluster: HRGMv2_0862_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0862_13 HRGMv2_0862_13_156 172654 173580 - CE7
TC HRGMv2_0862_13 HRGMv2_0862_13_157 173712 174539 - 3.A.1.5.27
TC HRGMv2_0862_13 HRGMv2_0862_13_158 174540 176555 - 3.A.1.5.25
TC HRGMv2_0862_13 HRGMv2_0862_13_159 176559 177515 - 3.A.1.5.38
TC HRGMv2_0862_13 HRGMv2_0862_13_160 177673 179286 - 3.A.1.5.27
pfam HRGMv2_0862_13 HRGMv2_0862_13_161 179652 181592 - GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC HRGMv2_0862_13 HRGMv2_0862_13_162 181599 183281 - 2.A.66.4.4
Gene ID: HRGMv2_0862_13_156
Type: CAZyme
Location: 172654 - 173580 (-)
Gene ID: HRGMv2_0862_13_157
Type: TC
Location: 173712 - 174539 (-)
Gene ID: HRGMv2_0862_13_158
Type: TC
Location: 174540 - 176555 (-)
Gene ID: HRGMv2_0862_13_159
Type: TC
Location: 176559 - 177515 (-)
Gene ID: HRGMv2_0862_13_160
Type: TC
Location: 177673 - 179286 (-)
Gene ID: HRGMv2_0862_13_161
Type: pfam
Location: 179652 - 181592 (-)
Gene ID: HRGMv2_0862_13_162
Type: TC
Location: 181599 - 183281 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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