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Cluster: HRGMv2_0862_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0862_7 HRGMv2_0862_7_56 65791 66129 - 4.A.3.1.2
TF HRGMv2_0862_7 HRGMv2_0862_7_57 66344 67348 - LacI
TC HRGMv2_0862_7 HRGMv2_0862_7_58 67704 69479 + 4.A.3.1.1
CAZyme HRGMv2_0862_7 HRGMv2_0862_7_59 69546 70985 + GH1
TF HRGMv2_0862_7 HRGMv2_0862_7_60 71346 72356 - LacI
TC HRGMv2_0862_7 HRGMv2_0862_7_61 72632 74410 + 4.A.3.1.1
CAZyme HRGMv2_0862_7 HRGMv2_0862_7_62 74486 75907 + GH1
TF HRGMv2_0862_7 HRGMv2_0862_7_63 76104 76868 - HTH_DeoR
sulfatase HRGMv2_0862_7 HRGMv2_0862_7_64 77075 78127 + S1_4
TC HRGMv2_0862_7 HRGMv2_0862_7_65 78454 78936 - 4.A.6.1.3
Gene ID: HRGMv2_0862_7_56
Type: TC
Location: 65791 - 66129 (-)
Gene ID: HRGMv2_0862_7_57
Type: TF
Location: 66344 - 67348 (-)
Gene ID: HRGMv2_0862_7_58
Type: TC
Location: 67704 - 69479 (+)
Gene ID: HRGMv2_0862_7_59
Type: CAZyme
Location: 69546 - 70985 (+)
Gene ID: HRGMv2_0862_7_60
Type: TF
Location: 71346 - 72356 (-)
Gene ID: HRGMv2_0862_7_61
Type: TC
Location: 72632 - 74410 (+)
Gene ID: HRGMv2_0862_7_62
Type: CAZyme
Location: 74486 - 75907 (+)
Gene ID: HRGMv2_0862_7_63
Type: TF
Location: 76104 - 76868 (-)
Gene ID: HRGMv2_0862_7_64
Type: sulfatase
Location: 77075 - 78127 (+)
Gene ID: HRGMv2_0862_7_65
Type: TC
Location: 78454 - 78936 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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