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Cluster: HRGMv2_0843_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0843_59 HRGMv2_0843_59_1 155 1099 - GH43_26
TF HRGMv2_0843_59 HRGMv2_0843_59_2 1141 2070 - HTH_5
TC HRGMv2_0843_59 HRGMv2_0843_59_3 2361 3254 - 3.A.1.1.34
TC HRGMv2_0843_59 HRGMv2_0843_59_4 3258 4148 - 3.A.1.1.34
TC HRGMv2_0843_59 HRGMv2_0843_59_5 4221 5606 - 3.A.1.1.34
TC HRGMv2_0843_59 HRGMv2_0843_59_6 6040 6882 - 3.A.1.132.3
pfam HRGMv2_0843_59 HRGMv2_0843_59_7 7022 7468 - GGACT
peptidase HRGMv2_0843_59 HRGMv2_0843_59_8 7462 8103 - C15.001
TC HRGMv2_0843_59 HRGMv2_0843_59_9 8258 9187 - 9.B.211.1.2
Gene ID: HRGMv2_0843_59_1
Type: CAZyme
Location: 155 - 1099 (-)
Gene ID: HRGMv2_0843_59_2
Type: TF
Location: 1141 - 2070 (-)
Gene ID: HRGMv2_0843_59_3
Type: TC
Location: 2361 - 3254 (-)
Gene ID: HRGMv2_0843_59_4
Type: TC
Location: 3258 - 4148 (-)
Gene ID: HRGMv2_0843_59_5
Type: TC
Location: 4221 - 5606 (-)
Gene ID: HRGMv2_0843_59_6
Type: TC
Location: 6040 - 6882 (-)
Gene ID: HRGMv2_0843_59_7
Type: pfam
Location: 7022 - 7468 (-)
Gene ID: HRGMv2_0843_59_8
Type: peptidase
Location: 7462 - 8103 (-)
Gene ID: HRGMv2_0843_59_9
Type: TC
Location: 8258 - 9187 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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