Cluster: HRGMv2_0843_CGC50
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0843
- CGC Family ID: CGCFAM_05632
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0843_369 | HRGMv2_0843_369_2 | 489 | 1361 | - | 3.A.1.132.1 |
| TF | HRGMv2_0843_369 | HRGMv2_0843_369_3 | 1366 | 1728 | - | GntR |
| STP | HRGMv2_0843_369 | HRGMv2_0843_369_4 | 1946 | 2503 | + | CYTH |
| CAZyme | HRGMv2_0843_369 | HRGMv2_0843_369_5 | 2536 | 3507 | - | CE4 |
| CAZyme | HRGMv2_0843_369 | HRGMv2_0843_369_6 | 3698 | 4696 | - | CE4 |
Gene ID: HRGMv2_0843_369_2
Type: TC
Location: 489 - 1361 (-)
Type: TC
Location: 489 - 1361 (-)
Gene ID: HRGMv2_0843_369_3
Type: TF
Location: 1366 - 1728 (-)
Type: TF
Location: 1366 - 1728 (-)
Gene ID: HRGMv2_0843_369_4
Type: STP
Location: 1946 - 2503 (+)
Type: STP
Location: 1946 - 2503 (+)
Gene ID: HRGMv2_0843_369_5
Type: CAZyme
Location: 2536 - 3507 (-)
Type: CAZyme
Location: 2536 - 3507 (-)
Gene ID: HRGMv2_0843_369_6
Type: CAZyme
Location: 3698 - 4696 (-)
Type: CAZyme
Location: 3698 - 4696 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp934754925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.