Cluster: HRGMv2_0843_CGC42
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 5
- Substrate:
- Genome ID: HRGMv2_0843
- CGC Family ID: CGCFAM_00040
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0843_297 | HRGMv2_0843_297_1 | 105 | 983 | + | GT2 |
| CAZyme | HRGMv2_0843_297 | HRGMv2_0843_297_2 | 1007 | 1921 | + | GT2 |
| CAZyme | HRGMv2_0843_297 | HRGMv2_0843_297_3 | 1934 | 3100 | + | GT4 |
| TC | HRGMv2_0843_297 | HRGMv2_0843_297_4 | 3102 | 4541 | + | 2.A.66.2.16 |
| CAZyme | HRGMv2_0843_297 | HRGMv2_0843_297_5 | 4627 | 5622 | + | GT2 |
| CAZyme | HRGMv2_0843_297 | HRGMv2_0843_297_6 | 5639 | 6529 | + | GT2 |
Gene ID: HRGMv2_0843_297_1
Type: CAZyme
Location: 105 - 983 (+)
Type: CAZyme
Location: 105 - 983 (+)
Gene ID: HRGMv2_0843_297_2
Type: CAZyme
Location: 1007 - 1921 (+)
Type: CAZyme
Location: 1007 - 1921 (+)
Gene ID: HRGMv2_0843_297_3
Type: CAZyme
Location: 1934 - 3100 (+)
Type: CAZyme
Location: 1934 - 3100 (+)
Gene ID: HRGMv2_0843_297_4
Type: TC
Location: 3102 - 4541 (+)
Type: TC
Location: 3102 - 4541 (+)
Gene ID: HRGMv2_0843_297_5
Type: CAZyme
Location: 4627 - 5622 (+)
Type: CAZyme
Location: 4627 - 5622 (+)
Gene ID: HRGMv2_0843_297_6
Type: CAZyme
Location: 5639 - 6529 (+)
Type: CAZyme
Location: 5639 - 6529 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp934754925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.