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Cluster: HRGMv2_0843_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0843_40 HRGMv2_0843_40_25 21161 22195 + 1.A.33.1.5
pfam HRGMv2_0843_40 HRGMv2_0843_40_26 22251 22781 - DUF1256
sulfatase HRGMv2_0843_40 HRGMv2_0843_40_27 24142 25317 + S1_2
CAZyme HRGMv2_0843_40 HRGMv2_0843_40_28 25357 26496 - CE9
TC HRGMv2_0843_40 HRGMv2_0843_40_29 26676 28907 + 3.A.7.16.1
NULL(UNKNOWN) HRGMv2_0843_40 HRGMv2_0843_40_30 28926 29918 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0843_40 HRGMv2_0843_40_31 29891 30577 + 3.A.11.1.4
pfam HRGMv2_0843_40 HRGMv2_0843_40_32 31017 31544 + Ribosomal_S30AE | Ribosom_S30AE_C
TC HRGMv2_0843_40 HRGMv2_0843_40_33 31853 34366 + 3.A.5.1.3
Gene ID: HRGMv2_0843_40_25
Type: TC
Location: 21161 - 22195 (+)
Gene ID: HRGMv2_0843_40_26
Type: pfam
Location: 22251 - 22781 (-)
Gene ID: HRGMv2_0843_40_27
Type: sulfatase
Location: 24142 - 25317 (+)
Gene ID: HRGMv2_0843_40_28
Type: CAZyme
Location: 25357 - 26496 (-)
Gene ID: HRGMv2_0843_40_29
Type: TC
Location: 26676 - 28907 (+)
Gene ID: HRGMv2_0843_40_30
Type:
Location: 28926 - 29918 (+)
Gene ID: HRGMv2_0843_40_31
Type: TC
Location: 29891 - 30577 (+)
Gene ID: HRGMv2_0843_40_32
Type: pfam
Location: 31017 - 31544 (+)
Gene ID: HRGMv2_0843_40_33
Type: TC
Location: 31853 - 34366 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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