Cluster: HRGMv2_0843_CGC31
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0843
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0843_235 | HRGMv2_0843_235_1 | 31 | 1461 | - | 3.A.6.1.1 |
| TC | HRGMv2_0843_235 | HRGMv2_0843_235_2 | 1955 | 2584 | - | 2.A.115.2.7 |
| CAZyme | HRGMv2_0843_235 | HRGMv2_0843_235_3 | 2589 | 4814 | - | GH36 |
| TF | HRGMv2_0843_235 | HRGMv2_0843_235_4 | 5052 | 5936 | + | HTH_AraC | HTH_AraC |
| TC | HRGMv2_0843_235 | HRGMv2_0843_235_5 | 5989 | 7347 | - | 2.A.2.1.1 |
Gene ID: HRGMv2_0843_235_1
Type: TC
Location: 31 - 1461 (-)
Type: TC
Location: 31 - 1461 (-)
Gene ID: HRGMv2_0843_235_2
Type: TC
Location: 1955 - 2584 (-)
Type: TC
Location: 1955 - 2584 (-)
Gene ID: HRGMv2_0843_235_3
Type: CAZyme
Location: 2589 - 4814 (-)
Type: CAZyme
Location: 2589 - 4814 (-)
Gene ID: HRGMv2_0843_235_4
Type: TF
Location: 5052 - 5936 (+)
Type: TF
Location: 5052 - 5936 (+)
Gene ID: HRGMv2_0843_235_5
Type: TC
Location: 5989 - 7347 (-)
Type: TC
Location: 5989 - 7347 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp934754925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.