Cluster: HRGMv2_0843_CGC29
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0843
- CGC Family ID: CGCFAM_01781
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0843_230 | HRGMv2_0843_230_18 | 16531 | 18516 | + | GH127 |
| TC | HRGMv2_0843_230 | HRGMv2_0843_230_19 | 18735 | 20141 | + | 2.A.66.1.33 |
| TF | HRGMv2_0843_230 | HRGMv2_0843_230_20 | 20328 | 21341 | + | LacI |
| peptidase | HRGMv2_0843_230 | HRGMv2_0843_230_21 | 21488 | 22456 | + | S33.UPW |
| CAZyme | HRGMv2_0843_230 | HRGMv2_0843_230_22 | 22553 | 24394 | + | GH36 |
Gene ID: HRGMv2_0843_230_18
Type: CAZyme
Location: 16531 - 18516 (+)
Type: CAZyme
Location: 16531 - 18516 (+)
Gene ID: HRGMv2_0843_230_19
Type: TC
Location: 18735 - 20141 (+)
Type: TC
Location: 18735 - 20141 (+)
Gene ID: HRGMv2_0843_230_20
Type: TF
Location: 20328 - 21341 (+)
Type: TF
Location: 20328 - 21341 (+)
Gene ID: HRGMv2_0843_230_21
Type: peptidase
Location: 21488 - 22456 (+)
Type: peptidase
Location: 21488 - 22456 (+)
Gene ID: HRGMv2_0843_230_22
Type: CAZyme
Location: 22553 - 24394 (+)
Type: CAZyme
Location: 22553 - 24394 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp934754925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.