Cluster: HRGMv2_0843_CGC28
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0843
- CGC Family ID: CGCFAM_09814
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0843_203 | HRGMv2_0843_203_9 | 7194 | 8378 | - | 2.A.86.1.8 |
| NULL(UNKNOWN) | HRGMv2_0843_203 | HRGMv2_0843_203_10 | 8685 | 8834 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0843_203 | HRGMv2_0843_203_11 | 9115 | 9807 | + | Lit |
| CAZyme | HRGMv2_0843_203 | HRGMv2_0843_203_12 | 9921 | 11066 | + | GT2 |
Gene ID: HRGMv2_0843_203_9
Type: TC
Location: 7194 - 8378 (-)
Type: TC
Location: 7194 - 8378 (-)
Gene ID: HRGMv2_0843_203_10
Type:
Location: 8685 - 8834 (+)
Type:
Location: 8685 - 8834 (+)
Gene ID: HRGMv2_0843_203_11
Type: pfam
Location: 9115 - 9807 (+)
Type: pfam
Location: 9115 - 9807 (+)
Gene ID: HRGMv2_0843_203_12
Type: CAZyme
Location: 9921 - 11066 (+)
Type: CAZyme
Location: 9921 - 11066 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp934754925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.