Cluster: HRGMv2_0843_CGC27
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 9
- Substrate:
- Genome ID: HRGMv2_0843
- CGC Family ID: CGCFAM_03509
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0843_191 | HRGMv2_0843_191_2 | 1052 | 1714 | + | 8.A.3.1.2 |
| CAZyme | HRGMv2_0843_191 | HRGMv2_0843_191_3 | 1750 | 2859 | + | GT4 |
| pfam | HRGMv2_0843_191 | HRGMv2_0843_191_4 | 2884 | 3291 | + | FdtA |
| pfam | HRGMv2_0843_191 | HRGMv2_0843_191_5 | 3303 | 4388 | + | Aminotran_5 | DegT_DnrJ_EryC1 |
| CAZyme | HRGMv2_0843_191 | HRGMv2_0843_191_6 | 4445 | 5362 | + | GT2 |
| CAZyme | HRGMv2_0843_191 | HRGMv2_0843_191_7 | 5383 | 6288 | + | GT2 |
| TC | HRGMv2_0843_191 | HRGMv2_0843_191_8 | 6300 | 7379 | + | 9.B.183.1.9 |
| CAZyme | HRGMv2_0843_191 | HRGMv2_0843_191_9 | 7392 | 8126 | + | GT32 |
| pfam | HRGMv2_0843_191 | HRGMv2_0843_191_10 | 8148 | 8750 | + | Hexapep | Hexapep_2 |
| CAZyme | HRGMv2_0843_191 | HRGMv2_0843_191_11 | 8765 | 9964 | + | GT4 |
| pfam | HRGMv2_0843_191 | HRGMv2_0843_191_12 | 9990 | 11102 | + | PS_pyruv_trans |
| CAZyme | HRGMv2_0843_191 | HRGMv2_0843_191_13 | 11123 | 12103 | + | GT2 |
| CAZyme | HRGMv2_0843_191 | HRGMv2_0843_191_14 | 12154 | 13014 | + | GT11 |
| pfam | HRGMv2_0843_191 | HRGMv2_0843_191_15 | 13034 | 14365 | + | Polysacc_synt |
| CAZyme | HRGMv2_0843_191 | HRGMv2_0843_191_16 | 14353 | 15135 | + | GT6 |
| CAZyme | HRGMv2_0843_191 | HRGMv2_0843_191_17 | 15213 | 16403 | + | GT4 |
Gene ID: HRGMv2_0843_191_2
Type: TC
Location: 1052 - 1714 (+)
Type: TC
Location: 1052 - 1714 (+)
Gene ID: HRGMv2_0843_191_3
Type: CAZyme
Location: 1750 - 2859 (+)
Type: CAZyme
Location: 1750 - 2859 (+)
Gene ID: HRGMv2_0843_191_4
Type: pfam
Location: 2884 - 3291 (+)
Type: pfam
Location: 2884 - 3291 (+)
Gene ID: HRGMv2_0843_191_5
Type: pfam
Location: 3303 - 4388 (+)
Type: pfam
Location: 3303 - 4388 (+)
Gene ID: HRGMv2_0843_191_6
Type: CAZyme
Location: 4445 - 5362 (+)
Type: CAZyme
Location: 4445 - 5362 (+)
Gene ID: HRGMv2_0843_191_7
Type: CAZyme
Location: 5383 - 6288 (+)
Type: CAZyme
Location: 5383 - 6288 (+)
Gene ID: HRGMv2_0843_191_8
Type: TC
Location: 6300 - 7379 (+)
Type: TC
Location: 6300 - 7379 (+)
Gene ID: HRGMv2_0843_191_9
Type: CAZyme
Location: 7392 - 8126 (+)
Type: CAZyme
Location: 7392 - 8126 (+)
Gene ID: HRGMv2_0843_191_10
Type: pfam
Location: 8148 - 8750 (+)
Type: pfam
Location: 8148 - 8750 (+)
Gene ID: HRGMv2_0843_191_11
Type: CAZyme
Location: 8765 - 9964 (+)
Type: CAZyme
Location: 8765 - 9964 (+)
Gene ID: HRGMv2_0843_191_12
Type: pfam
Location: 9990 - 11102 (+)
Type: pfam
Location: 9990 - 11102 (+)
Gene ID: HRGMv2_0843_191_13
Type: CAZyme
Location: 11123 - 12103 (+)
Type: CAZyme
Location: 11123 - 12103 (+)
Gene ID: HRGMv2_0843_191_14
Type: CAZyme
Location: 12154 - 13014 (+)
Type: CAZyme
Location: 12154 - 13014 (+)
Gene ID: HRGMv2_0843_191_15
Type: pfam
Location: 13034 - 14365 (+)
Type: pfam
Location: 13034 - 14365 (+)
Gene ID: HRGMv2_0843_191_16
Type: CAZyme
Location: 14353 - 15135 (+)
Type: CAZyme
Location: 14353 - 15135 (+)
Gene ID: HRGMv2_0843_191_17
Type: CAZyme
Location: 15213 - 16403 (+)
Type: CAZyme
Location: 15213 - 16403 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp934754925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.