Cluster: HRGMv2_0843_CGC25
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0843
- CGC Family ID: CGCFAM_08694
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0843_187 | HRGMv2_0843_187_13 | 15356 | 16579 | - | 2.A.103.1.3 |
| STP | HRGMv2_0843_187 | HRGMv2_0843_187_14 | 16738 | 17187 | - | FHA |
| pfam | HRGMv2_0843_187 | HRGMv2_0843_187_15 | 17262 | 20087 | - | UvrA_DNA-bind | UvrA_inter |
| CAZyme | HRGMv2_0843_187 | HRGMv2_0843_187_16 | 20400 | 22169 | - | GH3 |
| TC | HRGMv2_0843_187 | HRGMv2_0843_187_17 | 22246 | 23634 | - | 2.A.2.3.3 |
Gene ID: HRGMv2_0843_187_13
Type: TC
Location: 15356 - 16579 (-)
Type: TC
Location: 15356 - 16579 (-)
Gene ID: HRGMv2_0843_187_14
Type: STP
Location: 16738 - 17187 (-)
Type: STP
Location: 16738 - 17187 (-)
Gene ID: HRGMv2_0843_187_15
Type: pfam
Location: 17262 - 20087 (-)
Type: pfam
Location: 17262 - 20087 (-)
Gene ID: HRGMv2_0843_187_16
Type: CAZyme
Location: 20400 - 22169 (-)
Type: CAZyme
Location: 20400 - 22169 (-)
Gene ID: HRGMv2_0843_187_17
Type: TC
Location: 22246 - 23634 (-)
Type: TC
Location: 22246 - 23634 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp934754925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.