dbCAN Logo

Cluster: HRGMv2_0843_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0843_29 HRGMv2_0843_29_20 17340 19124 - 3.A.1.106.3
TC HRGMv2_0843_29 HRGMv2_0843_29_21 19126 20856 - 3.A.1.106.3
CAZyme HRGMv2_0843_29 HRGMv2_0843_29_22 21344 22144 + CE4
pfam HRGMv2_0843_29 HRGMv2_0843_29_23 22236 22868 - FTCD_C
CAZyme HRGMv2_0843_29 HRGMv2_0843_29_24 22881 24026 - GT4
pfam HRGMv2_0843_29 HRGMv2_0843_29_25 24032 25312 - Glyco_transf_4
TC HRGMv2_0843_29 HRGMv2_0843_29_26 25322 26857 - 2.A.66.4.7
CAZyme HRGMv2_0843_29 HRGMv2_0843_29_27 26857 27594 - GT26
Gene ID: HRGMv2_0843_29_20
Type: TC
Location: 17340 - 19124 (-)
Gene ID: HRGMv2_0843_29_21
Type: TC
Location: 19126 - 20856 (-)
Gene ID: HRGMv2_0843_29_22
Type: CAZyme
Location: 21344 - 22144 (+)
Gene ID: HRGMv2_0843_29_23
Type: pfam
Location: 22236 - 22868 (-)
Gene ID: HRGMv2_0843_29_24
Type: CAZyme
Location: 22881 - 24026 (-)
Gene ID: HRGMv2_0843_29_25
Type: pfam
Location: 24032 - 25312 (-)
Gene ID: HRGMv2_0843_29_26
Type: TC
Location: 25322 - 26857 (-)
Gene ID: HRGMv2_0843_29_27
Type: CAZyme
Location: 26857 - 27594 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List