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Cluster: HRGMv2_0843_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0843_140 HRGMv2_0843_140_2 994 2466 - GH32
STP HRGMv2_0843_140 HRGMv2_0843_140_3 2647 4257 - SBP_bac_1
TC HRGMv2_0843_140 HRGMv2_0843_140_4 4281 5177 - 3.A.1.1.29
TC HRGMv2_0843_140 HRGMv2_0843_140_5 5189 6181 - 3.A.1.1.10
CAZyme HRGMv2_0843_140 HRGMv2_0843_140_6 6483 7823 - GH32
TC HRGMv2_0843_140 HRGMv2_0843_140_7 7846 8943 - 3.A.1.1.26
TC HRGMv2_0843_140 HRGMv2_0843_140_8 8953 9804 - 3.A.1.1.20
TC HRGMv2_0843_140 HRGMv2_0843_140_9 9806 10675 - 3.A.1.1.20
Gene ID: HRGMv2_0843_140_2
Type: CAZyme
Location: 994 - 2466 (-)
Gene ID: HRGMv2_0843_140_3
Type: STP
Location: 2647 - 4257 (-)
Gene ID: HRGMv2_0843_140_4
Type: TC
Location: 4281 - 5177 (-)
Gene ID: HRGMv2_0843_140_5
Type: TC
Location: 5189 - 6181 (-)
Gene ID: HRGMv2_0843_140_6
Type: CAZyme
Location: 6483 - 7823 (-)
Gene ID: HRGMv2_0843_140_7
Type: TC
Location: 7846 - 8943 (-)
Gene ID: HRGMv2_0843_140_8
Type: TC
Location: 8953 - 9804 (-)
Gene ID: HRGMv2_0843_140_9
Type: TC
Location: 9806 - 10675 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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