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Cluster: HRGMv2_0843_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0843_136 HRGMv2_0843_136_7 4761 6035 + GH36
TC HRGMv2_0843_136 HRGMv2_0843_136_8 6182 7546 + 2.A.2.3.3
TF HRGMv2_0843_136 HRGMv2_0843_136_9 7567 8424 - HTH_AraC | HTH_AraC
TC HRGMv2_0843_136 HRGMv2_0843_136_10 8644 9897 + 3.A.1.1.28
TC HRGMv2_0843_136 HRGMv2_0843_136_11 9918 10781 + 3.A.1.1.28
TC HRGMv2_0843_136 HRGMv2_0843_136_12 10781 11665 + 3.A.1.1.28
TF HRGMv2_0843_136 HRGMv2_0843_136_13 11789 12775 + LacI
CAZyme HRGMv2_0843_136 HRGMv2_0843_136_14 12832 14295 - GH13_18
Gene ID: HRGMv2_0843_136_7
Type: CAZyme
Location: 4761 - 6035 (+)
Gene ID: HRGMv2_0843_136_8
Type: TC
Location: 6182 - 7546 (+)
Gene ID: HRGMv2_0843_136_9
Type: TF
Location: 7567 - 8424 (-)
Gene ID: HRGMv2_0843_136_10
Type: TC
Location: 8644 - 9897 (+)
Gene ID: HRGMv2_0843_136_11
Type: TC
Location: 9918 - 10781 (+)
Gene ID: HRGMv2_0843_136_12
Type: TC
Location: 10781 - 11665 (+)
Gene ID: HRGMv2_0843_136_13
Type: TF
Location: 11789 - 12775 (+)
Gene ID: HRGMv2_0843_136_14
Type: CAZyme
Location: 12832 - 14295 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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