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Cluster: HRGMv2_0843_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0843_109 HRGMv2_0843_109_3 1587 2765 + GH130_1
NULL(UNKNOWN) HRGMv2_0843_109 HRGMv2_0843_109_4 2898 3482 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0843_109 HRGMv2_0843_109_5 3688 4983 + Enolase_C | Enolase_N
CAZyme HRGMv2_0843_109 HRGMv2_0843_109_6 5186 6292 + CBM35inCE17 | CE17
CAZyme HRGMv2_0843_109 HRGMv2_0843_109_7 6304 7386 + CE2
CAZyme HRGMv2_0843_109 HRGMv2_0843_109_8 7620 8639 + GH130_2
CAZyme HRGMv2_0843_109 HRGMv2_0843_109_9 9075 10148 + GT28
CAZyme HRGMv2_0843_109 HRGMv2_0843_109_10 10151 10834 + CE4
TC HRGMv2_0843_109 HRGMv2_0843_109_11 10827 11906 + 4.D.2.1.5
Gene ID: HRGMv2_0843_109_3
Type: CAZyme
Location: 1587 - 2765 (+)
Gene ID: HRGMv2_0843_109_4
Type:
Location: 2898 - 3482 (+)
Gene ID: HRGMv2_0843_109_5
Type: pfam
Location: 3688 - 4983 (+)
Gene ID: HRGMv2_0843_109_6
Type: CAZyme
Location: 5186 - 6292 (+)
Gene ID: HRGMv2_0843_109_7
Type: CAZyme
Location: 6304 - 7386 (+)
Gene ID: HRGMv2_0843_109_8
Type: CAZyme
Location: 7620 - 8639 (+)
Gene ID: HRGMv2_0843_109_9
Type: CAZyme
Location: 9075 - 10148 (+)
Gene ID: HRGMv2_0843_109_10
Type: CAZyme
Location: 10151 - 10834 (+)
Gene ID: HRGMv2_0843_109_11
Type: TC
Location: 10827 - 11906 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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