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Cluster: HRGMv2_0843_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0843_107 HRGMv2_0843_107_12 13475 14182 - 9.B.116.3.1
TC HRGMv2_0843_107 HRGMv2_0843_107_13 14328 15107 + 2.A.5.5.5
pfam HRGMv2_0843_107 HRGMv2_0843_107_14 15525 16385 - Hydrolase | S6PP | S6PP | Hydrolase_3
CAZyme HRGMv2_0843_107 HRGMv2_0843_107_15 16571 18010 - GH1
TC HRGMv2_0843_107 HRGMv2_0843_107_16 18123 19991 - 4.A.1.2.11
pfam HRGMv2_0843_107 HRGMv2_0843_107_17 20370 21206 - PRD | PRD | CAT_RBD
TC HRGMv2_0843_107 HRGMv2_0843_107_18 21570 22280 - 2.A.115.2.12
Gene ID: HRGMv2_0843_107_12
Type: TC
Location: 13475 - 14182 (-)
Gene ID: HRGMv2_0843_107_13
Type: TC
Location: 14328 - 15107 (+)
Gene ID: HRGMv2_0843_107_14
Type: pfam
Location: 15525 - 16385 (-)
Gene ID: HRGMv2_0843_107_15
Type: CAZyme
Location: 16571 - 18010 (-)
Gene ID: HRGMv2_0843_107_16
Type: TC
Location: 18123 - 19991 (-)
Gene ID: HRGMv2_0843_107_17
Type: pfam
Location: 20370 - 21206 (-)
Gene ID: HRGMv2_0843_107_18
Type: TC
Location: 21570 - 22280 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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