Cluster: HRGMv2_0843_CGC14
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0843
- CGC Family ID: CGCFAM_06486
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0843_104 | HRGMv2_0843_104_2 | 1050 | 2042 | + | 3.A.1.1.10 |
| TC | HRGMv2_0843_104 | HRGMv2_0843_104_3 | 2055 | 2951 | + | 3.A.1.1.29 |
| pfam | HRGMv2_0843_104 | HRGMv2_0843_104_4 | 3004 | 4545 | + | SBP_bac_1 | DUF3502 |
| CAZyme | HRGMv2_0843_104 | HRGMv2_0843_104_5 | 4704 | 6782 | + | GH42 |
Gene ID: HRGMv2_0843_104_2
Type: TC
Location: 1050 - 2042 (+)
Type: TC
Location: 1050 - 2042 (+)
Gene ID: HRGMv2_0843_104_3
Type: TC
Location: 2055 - 2951 (+)
Type: TC
Location: 2055 - 2951 (+)
Gene ID: HRGMv2_0843_104_4
Type: pfam
Location: 3004 - 4545 (+)
Type: pfam
Location: 3004 - 4545 (+)
Gene ID: HRGMv2_0843_104_5
Type: CAZyme
Location: 4704 - 6782 (+)
Type: CAZyme
Location: 4704 - 6782 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp934754925
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.