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Cluster: HRGMv2_0843_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0843_87 HRGMv2_0843_87_16 16713 17951 - GH32
STP HRGMv2_0843_87 HRGMv2_0843_87_17 18000 18521 - PfkB
CAZyme HRGMv2_0843_87 HRGMv2_0843_87_18 18506 19435 - GH32
pfam HRGMv2_0843_87 HRGMv2_0843_87_19 19805 20845 - NA37
TF HRGMv2_0843_87 HRGMv2_0843_87_20 20917 21813 - HTH_1
TC HRGMv2_0843_87 HRGMv2_0843_87_21 22075 23304 + 2.A.1.15.12
pfam HRGMv2_0843_87 HRGMv2_0843_87_22 23368 24642 - MFS_3 | MFS_1
TC HRGMv2_0843_87 HRGMv2_0843_87_23 24632 25432 - 3.A.1.14.7
TC HRGMv2_0843_87 HRGMv2_0843_87_24 25435 26442 - 3.A.1.14.15
TC HRGMv2_0843_87 HRGMv2_0843_87_25 26442 27434 - 3.A.1.14.15
Gene ID: HRGMv2_0843_87_16
Type: CAZyme
Location: 16713 - 17951 (-)
Gene ID: HRGMv2_0843_87_17
Type: STP
Location: 18000 - 18521 (-)
Gene ID: HRGMv2_0843_87_18
Type: CAZyme
Location: 18506 - 19435 (-)
Gene ID: HRGMv2_0843_87_19
Type: pfam
Location: 19805 - 20845 (-)
Gene ID: HRGMv2_0843_87_20
Type: TF
Location: 20917 - 21813 (-)
Gene ID: HRGMv2_0843_87_21
Type: TC
Location: 22075 - 23304 (+)
Gene ID: HRGMv2_0843_87_22
Type: pfam
Location: 23368 - 24642 (-)
Gene ID: HRGMv2_0843_87_23
Type: TC
Location: 24632 - 25432 (-)
Gene ID: HRGMv2_0843_87_24
Type: TC
Location: 25435 - 26442 (-)
Gene ID: HRGMv2_0843_87_25
Type: TC
Location: 26442 - 27434 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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