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Cluster: HRGMv2_0831_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0831_9 HRGMv2_0831_9_48 69589 70599 - GT4
pfam HRGMv2_0831_9 HRGMv2_0831_9_49 70599 71723 - Epimerase_2
pfam HRGMv2_0831_9 HRGMv2_0831_9_50 71737 72591 - Epimerase | RmlD_sub_bind
TC HRGMv2_0831_9 HRGMv2_0831_9_51 72611 73654 - 9.B.18.2.1
NULL(UNKNOWN) HRGMv2_0831_9 HRGMv2_0831_9_52 73710 73949 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0831_9 HRGMv2_0831_9_53 74190 74321 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0831_9 HRGMv2_0831_9_54 74326 75537 - GT4
pfam HRGMv2_0831_9 HRGMv2_0831_9_55 75543 76496 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | NAD_binding_10 | GDP_Man_Dehyd
TC HRGMv2_0831_9 HRGMv2_0831_9_56 76526 77131 - 9.B.18.1.3
pfam HRGMv2_0831_9 HRGMv2_0831_9_57 77159 77722 - Hexapep | PglD_N
TC HRGMv2_0831_9 HRGMv2_0831_9_58 77766 79610 - 9.B.18.2.1
pfam HRGMv2_0831_9 HRGMv2_0831_9_59 79637 80407 - CpsB_CapC
TC HRGMv2_0831_9 HRGMv2_0831_9_60 80581 81234 - 8.A.3.2.1
TC HRGMv2_0831_9 HRGMv2_0831_9_61 81244 81921 - 8.A.3.2.4
peptidase HRGMv2_0831_9 HRGMv2_0831_9_62 82360 83826 - C110.UPW
CAZyme HRGMv2_0831_9 HRGMv2_0831_9_63 83843 85720 - GH73
Gene ID: HRGMv2_0831_9_48
Type: CAZyme
Location: 69589 - 70599 (-)
Gene ID: HRGMv2_0831_9_49
Type: pfam
Location: 70599 - 71723 (-)
Gene ID: HRGMv2_0831_9_50
Type: pfam
Location: 71737 - 72591 (-)
Gene ID: HRGMv2_0831_9_51
Type: TC
Location: 72611 - 73654 (-)
Gene ID: HRGMv2_0831_9_52
Type:
Location: 73710 - 73949 (-)
Gene ID: HRGMv2_0831_9_53
Type:
Location: 74190 - 74321 (-)
Gene ID: HRGMv2_0831_9_54
Type: CAZyme
Location: 74326 - 75537 (-)
Gene ID: HRGMv2_0831_9_55
Type: pfam
Location: 75543 - 76496 (-)
Gene ID: HRGMv2_0831_9_56
Type: TC
Location: 76526 - 77131 (-)
Gene ID: HRGMv2_0831_9_57
Type: pfam
Location: 77159 - 77722 (-)
Gene ID: HRGMv2_0831_9_58
Type: TC
Location: 77766 - 79610 (-)
Gene ID: HRGMv2_0831_9_59
Type: pfam
Location: 79637 - 80407 (-)
Gene ID: HRGMv2_0831_9_60
Type: TC
Location: 80581 - 81234 (-)
Gene ID: HRGMv2_0831_9_61
Type: TC
Location: 81244 - 81921 (-)
Gene ID: HRGMv2_0831_9_62
Type: peptidase
Location: 82360 - 83826 (-)
Gene ID: HRGMv2_0831_9_63
Type: CAZyme
Location: 83843 - 85720 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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