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Cluster: HRGMv2_0831_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0831_5 HRGMv2_0831_5_3 1098 2168 + 3.A.1.1.38
TC HRGMv2_0831_5 HRGMv2_0831_5_4 2168 3049 + 3.A.1.1.4
TC HRGMv2_0831_5 HRGMv2_0831_5_5 3058 3876 + 3.A.1.1.36
pfam HRGMv2_0831_5 HRGMv2_0831_5_6 3860 5152 + Lactamase_B_2
TC HRGMv2_0831_5 HRGMv2_0831_5_7 5169 6428 + 3.A.1.1.3
pfam HRGMv2_0831_5 HRGMv2_0831_5_8 6616 8130 + Metallophos | 5_nucleotid_C
TC HRGMv2_0831_5 HRGMv2_0831_5_9 8304 9575 + 2.A.49.9.2
CAZyme HRGMv2_0831_5 HRGMv2_0831_5_10 9622 11211 + GH20
STP HRGMv2_0831_5 HRGMv2_0831_5_11 11268 11471 + HMA
TC HRGMv2_0831_5 HRGMv2_0831_5_12 11609 12661 + 2.A.20.1.5
pfam HRGMv2_0831_5 HRGMv2_0831_5_13 12689 13312 + PhoU_div
pfam HRGMv2_0831_5 HRGMv2_0831_5_14 13676 14512 + PRD | PRD | CAT_RBD
TC HRGMv2_0831_5 HRGMv2_0831_5_15 14925 16787 + 4.A.1.2.11
CAZyme HRGMv2_0831_5 HRGMv2_0831_5_16 16890 18329 + GH1
pfam HRGMv2_0831_5 HRGMv2_0831_5_17 18809 22930 + Collagen_bind | Collagen_bind | Collagen_bind | Collagen_bind | SpaA | SpaA | SpaA | SpaA | SpaA | Big_8
TC HRGMv2_0831_5 HRGMv2_0831_5_18 23052 23522 + 9.B.10.1.1
Gene ID: HRGMv2_0831_5_3
Type: TC
Location: 1098 - 2168 (+)
Gene ID: HRGMv2_0831_5_4
Type: TC
Location: 2168 - 3049 (+)
Gene ID: HRGMv2_0831_5_5
Type: TC
Location: 3058 - 3876 (+)
Gene ID: HRGMv2_0831_5_6
Type: pfam
Location: 3860 - 5152 (+)
Gene ID: HRGMv2_0831_5_7
Type: TC
Location: 5169 - 6428 (+)
Gene ID: HRGMv2_0831_5_8
Type: pfam
Location: 6616 - 8130 (+)
Gene ID: HRGMv2_0831_5_9
Type: TC
Location: 8304 - 9575 (+)
Gene ID: HRGMv2_0831_5_10
Type: CAZyme
Location: 9622 - 11211 (+)
Gene ID: HRGMv2_0831_5_11
Type: STP
Location: 11268 - 11471 (+)
Gene ID: HRGMv2_0831_5_12
Type: TC
Location: 11609 - 12661 (+)
Gene ID: HRGMv2_0831_5_13
Type: pfam
Location: 12689 - 13312 (+)
Gene ID: HRGMv2_0831_5_14
Type: pfam
Location: 13676 - 14512 (+)
Gene ID: HRGMv2_0831_5_15
Type: TC
Location: 14925 - 16787 (+)
Gene ID: HRGMv2_0831_5_16
Type: CAZyme
Location: 16890 - 18329 (+)
Gene ID: HRGMv2_0831_5_17
Type: pfam
Location: 18809 - 22930 (+)
Gene ID: HRGMv2_0831_5_18
Type: TC
Location: 23052 - 23522 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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