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Cluster: HRGMv2_0831_CGC23

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0831_31 HRGMv2_0831_31_1 75 1838 + 9.B.33.1.1
TF HRGMv2_0831_31 HRGMv2_0831_31_2 1835 2581 + HTH_AraC | HTH_AraC
pfam HRGMv2_0831_31 HRGMv2_0831_31_3 2737 3801 + Bmp
TC HRGMv2_0831_31 HRGMv2_0831_31_4 4364 5461 + 3.A.1.2.10
TC HRGMv2_0831_31 HRGMv2_0831_31_5 5553 7082 + 3.A.1.2.12
TC HRGMv2_0831_31 HRGMv2_0831_31_6 7082 8170 + 3.A.1.2.17
TC HRGMv2_0831_31 HRGMv2_0831_31_7 8170 9117 + 3.A.1.2.12
TC HRGMv2_0831_31 HRGMv2_0831_31_8 9384 10784 + 3.A.6.1.1
CAZyme HRGMv2_0831_31 HRGMv2_0831_31_9 10949 12055 - GT28
Gene ID: HRGMv2_0831_31_1
Type: TC
Location: 75 - 1838 (+)
Gene ID: HRGMv2_0831_31_2
Type: TF
Location: 1835 - 2581 (+)
Gene ID: HRGMv2_0831_31_3
Type: pfam
Location: 2737 - 3801 (+)
Gene ID: HRGMv2_0831_31_4
Type: TC
Location: 4364 - 5461 (+)
Gene ID: HRGMv2_0831_31_5
Type: TC
Location: 5553 - 7082 (+)
Gene ID: HRGMv2_0831_31_6
Type: TC
Location: 7082 - 8170 (+)
Gene ID: HRGMv2_0831_31_7
Type: TC
Location: 8170 - 9117 (+)
Gene ID: HRGMv2_0831_31_8
Type: TC
Location: 9384 - 10784 (+)
Gene ID: HRGMv2_0831_31_9
Type: CAZyme
Location: 10949 - 12055 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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