Cluster: HRGMv2_0831_CGC20
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0831
- CGC Family ID: CGCFAM_01073
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0831_19 | HRGMv2_0831_19_6 | 3994 | 8301 | - | CBM32 | CBM51 |
| CAZyme | HRGMv2_0831_19 | HRGMv2_0831_19_7 | 8619 | 10097 | - | GH77 |
| TF | HRGMv2_0831_19 | HRGMv2_0831_19_8 | 10222 | 11244 | - | LacI |
| TC | HRGMv2_0831_19 | HRGMv2_0831_19_9 | 11327 | 12235 | - | 3.A.1.1.26 |
| TC | HRGMv2_0831_19 | HRGMv2_0831_19_10 | 12237 | 13154 | - | 3.A.1.1.22 |
| TC | HRGMv2_0831_19 | HRGMv2_0831_19_11 | 13387 | 14592 | - | 3.A.1.1.22 |
Gene ID: HRGMv2_0831_19_6
Type: CAZyme
Location: 3994 - 8301 (-)
Type: CAZyme
Location: 3994 - 8301 (-)
Gene ID: HRGMv2_0831_19_7
Type: CAZyme
Location: 8619 - 10097 (-)
Type: CAZyme
Location: 8619 - 10097 (-)
Gene ID: HRGMv2_0831_19_8
Type: TF
Location: 10222 - 11244 (-)
Type: TF
Location: 10222 - 11244 (-)
Gene ID: HRGMv2_0831_19_9
Type: TC
Location: 11327 - 12235 (-)
Type: TC
Location: 11327 - 12235 (-)
Gene ID: HRGMv2_0831_19_10
Type: TC
Location: 12237 - 13154 (-)
Type: TC
Location: 12237 - 13154 (-)
Gene ID: HRGMv2_0831_19_11
Type: TC
Location: 13387 - 14592 (-)
Type: TC
Location: 13387 - 14592 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900759995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.