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Cluster: HRGMv2_0831_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0831_2 HRGMv2_0831_2_127 138010 138975 + GH73
pfam HRGMv2_0831_2 HRGMv2_0831_2_128 139195 139464 - Acylphosphatase
pfam HRGMv2_0831_2 HRGMv2_0831_2_129 139603 140010 + NDK
TC HRGMv2_0831_2 HRGMv2_0831_2_130 140129 141190 - 3.A.1.11.7
TC HRGMv2_0831_2 HRGMv2_0831_2_131 141177 141986 - 3.A.1.11.8
TC HRGMv2_0831_2 HRGMv2_0831_2_132 141980 142834 - 3.A.1.11.2
TC HRGMv2_0831_2 HRGMv2_0831_2_133 142827 143876 - 3.A.1.11.8
Gene ID: HRGMv2_0831_2_127
Type: CAZyme
Location: 138010 - 138975 (+)
Gene ID: HRGMv2_0831_2_128
Type: pfam
Location: 139195 - 139464 (-)
Gene ID: HRGMv2_0831_2_129
Type: pfam
Location: 139603 - 140010 (+)
Gene ID: HRGMv2_0831_2_130
Type: TC
Location: 140129 - 141190 (-)
Gene ID: HRGMv2_0831_2_131
Type: TC
Location: 141177 - 141986 (-)
Gene ID: HRGMv2_0831_2_132
Type: TC
Location: 141980 - 142834 (-)
Gene ID: HRGMv2_0831_2_133
Type: TC
Location: 142827 - 143876 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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