Cluster: HRGMv2_0831_CGC16
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0831
- CGC Family ID: CGCFAM_05891
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0831_16 | HRGMv2_0831_16_51 | 53279 | 53926 | + | 1.C.113.1.3 |
| CAZyme | HRGMv2_0831_16 | HRGMv2_0831_16_52 | 54045 | 57614 | - | GH29 |
| NULL(UNKNOWN) | HRGMv2_0831_16 | HRGMv2_0831_16_53 | 57805 | 58557 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0831_16 | HRGMv2_0831_16_54 | 58557 | 59432 | - | 3.A.1.132.6 |
| TF | HRGMv2_0831_16 | HRGMv2_0831_16_55 | 59436 | 59798 | - | GntR |
| TC | HRGMv2_0831_16 | HRGMv2_0831_16_56 | 60030 | 60974 | + | 3.A.1.121.4 |
Gene ID: HRGMv2_0831_16_51
Type: TC
Location: 53279 - 53926 (+)
Type: TC
Location: 53279 - 53926 (+)
Gene ID: HRGMv2_0831_16_52
Type: CAZyme
Location: 54045 - 57614 (-)
Type: CAZyme
Location: 54045 - 57614 (-)
Gene ID: HRGMv2_0831_16_53
Type:
Location: 57805 - 58557 (-)
Type:
Location: 57805 - 58557 (-)
Gene ID: HRGMv2_0831_16_54
Type: TC
Location: 58557 - 59432 (-)
Type: TC
Location: 58557 - 59432 (-)
Gene ID: HRGMv2_0831_16_55
Type: TF
Location: 59436 - 59798 (-)
Type: TF
Location: 59436 - 59798 (-)
Gene ID: HRGMv2_0831_16_56
Type: TC
Location: 60030 - 60974 (+)
Type: TC
Location: 60030 - 60974 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900759995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.