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Cluster: HRGMv2_0831_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0831_15 HRGMv2_0831_15_18 19519 20796 + 2.A.26.1.5
NULL(UNKNOWN) HRGMv2_0831_15 HRGMv2_0831_15_19 21036 22058 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0831_15 HRGMv2_0831_15_20 22039 22935 - 3.A.1.126.1
NULL(UNKNOWN) HRGMv2_0831_15 HRGMv2_0831_15_21 22987 23568 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0831_15 HRGMv2_0831_15_22 23686 24771 - GH177
TC HRGMv2_0831_15 HRGMv2_0831_15_23 24791 25390 - 9.B.18.1.3
pfam HRGMv2_0831_15 HRGMv2_0831_15_24 25395 26924 - Wzy_C
TC HRGMv2_0831_15 HRGMv2_0831_15_25 26959 28815 - 9.B.18.2.1
pfam HRGMv2_0831_15 HRGMv2_0831_15_26 29006 30055 + Epimerase_2
CAZyme HRGMv2_0831_15 HRGMv2_0831_15_27 30104 31330 - GT4
pfam HRGMv2_0831_15 HRGMv2_0831_15_28 31343 32173 - LicD
CAZyme HRGMv2_0831_15 HRGMv2_0831_15_29 32188 33168 - GT2
CAZyme HRGMv2_0831_15 HRGMv2_0831_15_30 33190 34035 - GT2
TC HRGMv2_0831_15 HRGMv2_0831_15_31 34032 35507 - 2.A.66.2.22
Gene ID: HRGMv2_0831_15_18
Type: TC
Location: 19519 - 20796 (+)
Gene ID: HRGMv2_0831_15_19
Type:
Location: 21036 - 22058 (-)
Gene ID: HRGMv2_0831_15_20
Type: TC
Location: 22039 - 22935 (-)
Gene ID: HRGMv2_0831_15_21
Type:
Location: 22987 - 23568 (-)
Gene ID: HRGMv2_0831_15_22
Type: CAZyme
Location: 23686 - 24771 (-)
Gene ID: HRGMv2_0831_15_23
Type: TC
Location: 24791 - 25390 (-)
Gene ID: HRGMv2_0831_15_24
Type: pfam
Location: 25395 - 26924 (-)
Gene ID: HRGMv2_0831_15_25
Type: TC
Location: 26959 - 28815 (-)
Gene ID: HRGMv2_0831_15_26
Type: pfam
Location: 29006 - 30055 (+)
Gene ID: HRGMv2_0831_15_27
Type: CAZyme
Location: 30104 - 31330 (-)
Gene ID: HRGMv2_0831_15_28
Type: pfam
Location: 31343 - 32173 (-)
Gene ID: HRGMv2_0831_15_29
Type: CAZyme
Location: 32188 - 33168 (-)
Gene ID: HRGMv2_0831_15_30
Type: CAZyme
Location: 33190 - 34035 (-)
Gene ID: HRGMv2_0831_15_31
Type: TC
Location: 34032 - 35507 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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