Cluster: HRGMv2_0831_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0831
- CGC Family ID: CGCFAM_09750
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0831_14 | HRGMv2_0831_14_35 | 35965 | 37947 | - | 1.B.52.2.2 |
| TC | HRGMv2_0831_14 | HRGMv2_0831_14_36 | 38174 | 38908 | - | 3.A.1.3.20 |
| TC | HRGMv2_0831_14 | HRGMv2_0831_14_37 | 38929 | 39690 | - | 3.A.1.3.20 |
| TC | HRGMv2_0831_14 | HRGMv2_0831_14_38 | 39760 | 40587 | - | 3.A.1.3.20 |
| CAZyme | HRGMv2_0831_14 | HRGMv2_0831_14_39 | 41060 | 41863 | - | CE1 |
Gene ID: HRGMv2_0831_14_35
Type: TC
Location: 35965 - 37947 (-)
Type: TC
Location: 35965 - 37947 (-)
Gene ID: HRGMv2_0831_14_36
Type: TC
Location: 38174 - 38908 (-)
Type: TC
Location: 38174 - 38908 (-)
Gene ID: HRGMv2_0831_14_37
Type: TC
Location: 38929 - 39690 (-)
Type: TC
Location: 38929 - 39690 (-)
Gene ID: HRGMv2_0831_14_38
Type: TC
Location: 39760 - 40587 (-)
Type: TC
Location: 39760 - 40587 (-)
Gene ID: HRGMv2_0831_14_39
Type: CAZyme
Location: 41060 - 41863 (-)
Type: CAZyme
Location: 41060 - 41863 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium sp900759995
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.