Cluster: HRGMv2_0823_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0823
- CGC Family ID: CGCFAM_00026
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0823_6 | HRGMv2_0823_6_2 | 3258 | 4136 | + | 3.A.1.1.10 |
| TC | HRGMv2_0823_6 | HRGMv2_0823_6_3 | 4155 | 5072 | + | 3.A.1.1.29 |
| STP | HRGMv2_0823_6 | HRGMv2_0823_6_4 | 5249 | 6724 | + | SBP_bac_1 |
| CAZyme | HRGMv2_0823_6 | HRGMv2_0823_6_5 | 6845 | 9751 | + | GH2 |
| TF | HRGMv2_0823_6 | HRGMv2_0823_6_6 | 10027 | 10419 | - | MerR |
| pfam | HRGMv2_0823_6 | HRGMv2_0823_6_7 | 10538 | 11065 | + | Flavin_Reduct |
| TC | HRGMv2_0823_6 | HRGMv2_0823_6_8 | 11077 | 11919 | + | 8.A.5.1.4 |
Gene ID: HRGMv2_0823_6_2
Type: TC
Location: 3258 - 4136 (+)
Type: TC
Location: 3258 - 4136 (+)
Gene ID: HRGMv2_0823_6_3
Type: TC
Location: 4155 - 5072 (+)
Type: TC
Location: 4155 - 5072 (+)
Gene ID: HRGMv2_0823_6_4
Type: STP
Location: 5249 - 6724 (+)
Type: STP
Location: 5249 - 6724 (+)
Gene ID: HRGMv2_0823_6_5
Type: CAZyme
Location: 6845 - 9751 (+)
Type: CAZyme
Location: 6845 - 9751 (+)
Gene ID: HRGMv2_0823_6_6
Type: TF
Location: 10027 - 10419 (-)
Type: TF
Location: 10027 - 10419 (-)
Gene ID: HRGMv2_0823_6_7
Type: pfam
Location: 10538 - 11065 (+)
Type: pfam
Location: 10538 - 11065 (+)
Gene ID: HRGMv2_0823_6_8
Type: TC
Location: 11077 - 11919 (+)
Type: TC
Location: 11077 - 11919 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Faecivicinus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.