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Cluster: HRGMv2_0823_CGC10

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0823_18 HRGMv2_0823_18_15 15882 17216 + 9.A.40.2.1
pfam HRGMv2_0823_18 HRGMv2_0823_18_16 17469 18845 + VWA | VWA_2
sulfatase HRGMv2_0823_18 HRGMv2_0823_18_17 18921 19454 - S1_4
CAZyme HRGMv2_0823_18 HRGMv2_0823_18_18 19646 20464 - CE1
TC HRGMv2_0823_18 HRGMv2_0823_18_19 20486 21364 - 3.A.1.1.34
TC HRGMv2_0823_18 HRGMv2_0823_18_20 21378 22310 - 3.A.1.1.36
STP HRGMv2_0823_18 HRGMv2_0823_18_21 22404 23639 - SBP_bac_1
TF HRGMv2_0823_18 HRGMv2_0823_18_22 23972 24772 + HTH_AraC | HTH_AraC
CAZyme HRGMv2_0823_18 HRGMv2_0823_18_23 24911 25705 + CE1
Gene ID: HRGMv2_0823_18_15
Type: TC
Location: 15882 - 17216 (+)
Gene ID: HRGMv2_0823_18_16
Type: pfam
Location: 17469 - 18845 (+)
Gene ID: HRGMv2_0823_18_17
Type: sulfatase
Location: 18921 - 19454 (-)
Gene ID: HRGMv2_0823_18_18
Type: CAZyme
Location: 19646 - 20464 (-)
Gene ID: HRGMv2_0823_18_19
Type: TC
Location: 20486 - 21364 (-)
Gene ID: HRGMv2_0823_18_20
Type: TC
Location: 21378 - 22310 (-)
Gene ID: HRGMv2_0823_18_21
Type: STP
Location: 22404 - 23639 (-)
Gene ID: HRGMv2_0823_18_22
Type: TF
Location: 23972 - 24772 (+)
Gene ID: HRGMv2_0823_18_23
Type: CAZyme
Location: 24911 - 25705 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Christensenellales
→
Family
Aristaeellaceae
→
Genus
Faecivicinus
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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