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Cluster: HRGMv2_0823_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0823_1 HRGMv2_0823_1_4 6442 7158 + 2.A.78.1.1
TC HRGMv2_0823_1 HRGMv2_0823_1_5 7151 7477 + 2.A.78.1.1
NULL(UNKNOWN) HRGMv2_0823_1 HRGMv2_0823_1_6 7500 8156 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0823_1 HRGMv2_0823_1_7 8161 8682 + Acetyltransf_1 | Acetyltransf_3
TC HRGMv2_0823_1 HRGMv2_0823_1_8 8879 10066 - 3.A.11.1.1
CAZyme HRGMv2_0823_1 HRGMv2_0823_1_9 10045 11172 - GH179
NULL(UNKNOWN) HRGMv2_0823_1 HRGMv2_0823_1_10 11513 13792 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0823_1 HRGMv2_0823_1_11 14098 15966 + 9.B.18.2.1
Gene ID: HRGMv2_0823_1_4
Type: TC
Location: 6442 - 7158 (+)
Gene ID: HRGMv2_0823_1_5
Type: TC
Location: 7151 - 7477 (+)
Gene ID: HRGMv2_0823_1_6
Type:
Location: 7500 - 8156 (+)
Gene ID: HRGMv2_0823_1_7
Type: pfam
Location: 8161 - 8682 (+)
Gene ID: HRGMv2_0823_1_8
Type: TC
Location: 8879 - 10066 (-)
Gene ID: HRGMv2_0823_1_9
Type: CAZyme
Location: 10045 - 11172 (-)
Gene ID: HRGMv2_0823_1_10
Type:
Location: 11513 - 13792 (+)
Gene ID: HRGMv2_0823_1_11
Type: TC
Location: 14098 - 15966 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
Christensenellales
→
Family
Aristaeellaceae
→
Genus
Faecivicinus
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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