Cluster: HRGMv2_0822_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0822
- CGC Family ID: CGCFAM_01463
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0822_30 | HRGMv2_0822_30_3 | 2243 | 3772 | + | GH77 |
| NULL(UNKNOWN) | HRGMv2_0822_30 | HRGMv2_0822_30_4 | 3769 | 4296 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0822_30 | HRGMv2_0822_30_5 | 4359 | 4598 | + | 3.D.1.6.4 |
| NULL(UNKNOWN) | HRGMv2_0822_30 | HRGMv2_0822_30_6 | 4588 | 4713 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0822_30 | HRGMv2_0822_30_7 | 4794 | 5723 | + | 3.A.1.105.3 |
Gene ID: HRGMv2_0822_30_3
Type: CAZyme
Location: 2243 - 3772 (+)
Type: CAZyme
Location: 2243 - 3772 (+)
Gene ID: HRGMv2_0822_30_4
Type:
Location: 3769 - 4296 (+)
Type:
Location: 3769 - 4296 (+)
Gene ID: HRGMv2_0822_30_5
Type: TC
Location: 4359 - 4598 (+)
Type: TC
Location: 4359 - 4598 (+)
Gene ID: HRGMv2_0822_30_6
Type:
Location: 4588 - 4713 (-)
Type:
Location: 4588 - 4713 (-)
Gene ID: HRGMv2_0822_30_7
Type: TC
Location: 4794 - 5723 (+)
Type: TC
Location: 4794 - 5723 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-917
Genus
Limadaptatus
Species
Limadaptatus sp900754695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.