Cluster: HRGMv2_0822_CGC6
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_0822
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0822_29 | HRGMv2_0822_29_2 | 561 | 2618 | - | 2.A.1.2.88 |
| CAZyme | HRGMv2_0822_29 | HRGMv2_0822_29_3 | 2905 | 4713 | - | GH13_39 |
| CAZyme | HRGMv2_0822_29 | HRGMv2_0822_29_4 | 4814 | 7243 | - | GT35 |
| CAZyme | HRGMv2_0822_29 | HRGMv2_0822_29_5 | 7548 | 8969 | - | GT5 |
| pfam | HRGMv2_0822_29 | HRGMv2_0822_29_6 | 9043 | 10158 | - | NTP_transferase | Hexapep_GlmU |
| pfam | HRGMv2_0822_29 | HRGMv2_0822_29_7 | 10169 | 11374 | - | NTP_transferase | Hexapep_GlmU |
| CAZyme | HRGMv2_0822_29 | HRGMv2_0822_29_8 | 11371 | 13263 | - | CBM48 | GH13_9 |
Gene ID: HRGMv2_0822_29_2
Type: TC
Location: 561 - 2618 (-)
Type: TC
Location: 561 - 2618 (-)
Gene ID: HRGMv2_0822_29_3
Type: CAZyme
Location: 2905 - 4713 (-)
Type: CAZyme
Location: 2905 - 4713 (-)
Gene ID: HRGMv2_0822_29_4
Type: CAZyme
Location: 4814 - 7243 (-)
Type: CAZyme
Location: 4814 - 7243 (-)
Gene ID: HRGMv2_0822_29_5
Type: CAZyme
Location: 7548 - 8969 (-)
Type: CAZyme
Location: 7548 - 8969 (-)
Gene ID: HRGMv2_0822_29_6
Type: pfam
Location: 9043 - 10158 (-)
Type: pfam
Location: 9043 - 10158 (-)
Gene ID: HRGMv2_0822_29_7
Type: pfam
Location: 10169 - 11374 (-)
Type: pfam
Location: 10169 - 11374 (-)
Gene ID: HRGMv2_0822_29_8
Type: CAZyme
Location: 11371 - 13263 (-)
Type: CAZyme
Location: 11371 - 13263 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-917
Genus
Limadaptatus
Species
Limadaptatus sp900754695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.