Cluster: HRGMv2_0822_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0822
- CGC Family ID: CGCFAM_02721
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0822_20 | HRGMv2_0822_20_21 | 23466 | 24506 | - | CE4 |
| TC | HRGMv2_0822_20 | HRGMv2_0822_20_22 | 24726 | 25610 | + | 3.A.1.7.5 |
| TC | HRGMv2_0822_20 | HRGMv2_0822_20_23 | 25749 | 26585 | + | 3.A.1.7.5 |
| TC | HRGMv2_0822_20 | HRGMv2_0822_20_24 | 26582 | 27517 | + | 3.A.1.7.5 |
| TC | HRGMv2_0822_20 | HRGMv2_0822_20_25 | 27517 | 28320 | + | 3.A.1.7.5 |
Gene ID: HRGMv2_0822_20_21
Type: CAZyme
Location: 23466 - 24506 (-)
Type: CAZyme
Location: 23466 - 24506 (-)
Gene ID: HRGMv2_0822_20_22
Type: TC
Location: 24726 - 25610 (+)
Type: TC
Location: 24726 - 25610 (+)
Gene ID: HRGMv2_0822_20_23
Type: TC
Location: 25749 - 26585 (+)
Type: TC
Location: 25749 - 26585 (+)
Gene ID: HRGMv2_0822_20_24
Type: TC
Location: 26582 - 27517 (+)
Type: TC
Location: 26582 - 27517 (+)
Gene ID: HRGMv2_0822_20_25
Type: TC
Location: 27517 - 28320 (+)
Type: TC
Location: 27517 - 28320 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
CAG-917
Genus
Limadaptatus
Species
Limadaptatus sp900754695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.