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Cluster: HRGMv2_0821_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0821_20 HRGMv2_0821_20_12 11696 12901 + 2.A.86.1.11
pfam HRGMv2_0821_20 HRGMv2_0821_20_13 13128 14528 - NosD | NosD | Beta_helix | Beta_helix | Beta_helix | Beta_helix
CAZyme HRGMv2_0821_20 HRGMv2_0821_20_14 14717 15499 - CBM9
CAZyme HRGMv2_0821_20 HRGMv2_0821_20_15 15605 18121 - GH3
pfam HRGMv2_0821_20 HRGMv2_0821_20_16 18409 19548 - Rotamase_3
TF HRGMv2_0821_20 HRGMv2_0821_20_17 19796 21271 + HTH_AraC | HTH_AraC
TC HRGMv2_0821_20 HRGMv2_0821_20_18 21440 22564 - 3.A.1.1.22
CAZyme HRGMv2_0821_20 HRGMv2_0821_20_19 22675 23766 - GH3
Gene ID: HRGMv2_0821_20_12
Type: TC
Location: 11696 - 12901 (+)
Gene ID: HRGMv2_0821_20_13
Type: pfam
Location: 13128 - 14528 (-)
Gene ID: HRGMv2_0821_20_14
Type: CAZyme
Location: 14717 - 15499 (-)
Gene ID: HRGMv2_0821_20_15
Type: CAZyme
Location: 15605 - 18121 (-)
Gene ID: HRGMv2_0821_20_16
Type: pfam
Location: 18409 - 19548 (-)
Gene ID: HRGMv2_0821_20_17
Type: TF
Location: 19796 - 21271 (+)
Gene ID: HRGMv2_0821_20_18
Type: TC
Location: 21440 - 22564 (-)
Gene ID: HRGMv2_0821_20_19
Type: CAZyme
Location: 22675 - 23766 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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