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Cluster: HRGMv2_0821_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0821_19 HRGMv2_0821_19_11 7156 8115 - CE7
pfam HRGMv2_0821_19 HRGMv2_0821_19_12 8234 9271 + PG_binding_1 | SH3_3
CAZyme HRGMv2_0821_19 HRGMv2_0821_19_13 9373 12492 - GH38
pfam HRGMv2_0821_19 HRGMv2_0821_19_14 12734 13570 - Aldo_ket_red
TC HRGMv2_0821_19 HRGMv2_0821_19_15 13586 14572 - 3.A.1.5.13
TC HRGMv2_0821_19 HRGMv2_0821_19_16 14565 15557 - 3.A.1.5.13
TC HRGMv2_0821_19 HRGMv2_0821_19_17 15559 16386 - 3.A.1.5.20
TC HRGMv2_0821_19 HRGMv2_0821_19_18 16430 17428 - 3.A.1.5.13
TC HRGMv2_0821_19 HRGMv2_0821_19_19 17575 19458 - 3.A.1.5.30
Gene ID: HRGMv2_0821_19_11
Type: CAZyme
Location: 7156 - 8115 (-)
Gene ID: HRGMv2_0821_19_12
Type: pfam
Location: 8234 - 9271 (+)
Gene ID: HRGMv2_0821_19_13
Type: CAZyme
Location: 9373 - 12492 (-)
Gene ID: HRGMv2_0821_19_14
Type: pfam
Location: 12734 - 13570 (-)
Gene ID: HRGMv2_0821_19_15
Type: TC
Location: 13586 - 14572 (-)
Gene ID: HRGMv2_0821_19_16
Type: TC
Location: 14565 - 15557 (-)
Gene ID: HRGMv2_0821_19_17
Type: TC
Location: 15559 - 16386 (-)
Gene ID: HRGMv2_0821_19_18
Type: TC
Location: 16430 - 17428 (-)
Gene ID: HRGMv2_0821_19_19
Type: TC
Location: 17575 - 19458 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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