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Cluster: HRGMv2_0821_CGC24

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0821_123 HRGMv2_0821_123_2 1485 2969 - GH13_36
TC HRGMv2_0821_123 HRGMv2_0821_123_3 2981 3853 - 3.A.1.1.27
TC HRGMv2_0821_123 HRGMv2_0821_123_4 3850 5226 - 3.A.1.1.27
Gene ID: HRGMv2_0821_123_2
Type: CAZyme
Location: 1485 - 2969 (-)
Gene ID: HRGMv2_0821_123_3
Type: TC
Location: 2981 - 3853 (-)
Gene ID: HRGMv2_0821_123_4
Type: TC
Location: 3850 - 5226 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0821_123_4 vegetarian > vegan 1.68008 0.03673

🧭 Explore Read Mapping of CGC

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