Cluster: HRGMv2_0821_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0821
- CGC Family ID: CGCFAM_01639
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0821_90 | HRGMv2_0821_90_2 | 295 | 1239 | + | 3.A.1.1.10 |
| TC | HRGMv2_0821_90 | HRGMv2_0821_90_3 | 1254 | 2138 | + | 3.A.1.1.10 |
| STP | HRGMv2_0821_90 | HRGMv2_0821_90_4 | 2193 | 3776 | + | SBP_bac_1 |
| TF | HRGMv2_0821_90 | HRGMv2_0821_90_5 | 3942 | 6263 | + | HTH_AraC | HTH_AraC |
| CAZyme | HRGMv2_0821_90 | HRGMv2_0821_90_6 | 6256 | 7989 | + | GH163 |
Gene ID: HRGMv2_0821_90_2
Type: TC
Location: 295 - 1239 (+)
Type: TC
Location: 295 - 1239 (+)
Gene ID: HRGMv2_0821_90_3
Type: TC
Location: 1254 - 2138 (+)
Type: TC
Location: 1254 - 2138 (+)
Gene ID: HRGMv2_0821_90_4
Type: STP
Location: 2193 - 3776 (+)
Type: STP
Location: 2193 - 3776 (+)
Gene ID: HRGMv2_0821_90_5
Type: TF
Location: 3942 - 6263 (+)
Type: TF
Location: 3942 - 6263 (+)
Gene ID: HRGMv2_0821_90_6
Type: CAZyme
Location: 6256 - 7989 (+)
Type: CAZyme
Location: 6256 - 7989 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Avichristensenella
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.