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Cluster: HRGMv2_0821_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0821_2 HRGMv2_0821_2_19 25734 27452 + 3.A.1.5.2
TC HRGMv2_0821_2 HRGMv2_0821_2_20 27571 27816 + 3.A.1.5.22
TC HRGMv2_0821_2 HRGMv2_0821_2_21 27794 28507 + 3.A.1.5.2
TC HRGMv2_0821_2 HRGMv2_0821_2_22 28512 29273 + 3.A.1.5.2
TC HRGMv2_0821_2 HRGMv2_0821_2_23 29467 29892 + 3.A.1.5.2
STP HRGMv2_0821_2 HRGMv2_0821_2_24 30486 31322 - Fer4 | Fer4
CAZyme HRGMv2_0821_2 HRGMv2_0821_2_25 31431 33614 - GH36
CAZyme HRGMv2_0821_2 HRGMv2_0821_2_26 33721 36774 - GH2
TC HRGMv2_0821_2 HRGMv2_0821_2_27 36828 37652 - 3.A.1.1.4
TC HRGMv2_0821_2 HRGMv2_0821_2_28 37649 38560 - 3.A.1.1.4
TC HRGMv2_0821_2 HRGMv2_0821_2_29 38660 39913 - 3.A.1.1.4
Gene ID: HRGMv2_0821_2_19
Type: TC
Location: 25734 - 27452 (+)
Gene ID: HRGMv2_0821_2_20
Type: TC
Location: 27571 - 27816 (+)
Gene ID: HRGMv2_0821_2_21
Type: TC
Location: 27794 - 28507 (+)
Gene ID: HRGMv2_0821_2_22
Type: TC
Location: 28512 - 29273 (+)
Gene ID: HRGMv2_0821_2_23
Type: TC
Location: 29467 - 29892 (+)
Gene ID: HRGMv2_0821_2_24
Type: STP
Location: 30486 - 31322 (-)
Gene ID: HRGMv2_0821_2_25
Type: CAZyme
Location: 31431 - 33614 (-)
Gene ID: HRGMv2_0821_2_26
Type: CAZyme
Location: 33721 - 36774 (-)
Gene ID: HRGMv2_0821_2_27
Type: TC
Location: 36828 - 37652 (-)
Gene ID: HRGMv2_0821_2_28
Type: TC
Location: 37649 - 38560 (-)
Gene ID: HRGMv2_0821_2_29
Type: TC
Location: 38660 - 39913 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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