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Cluster: HRGMv2_0812_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0812_12 HRGMv2_0812_12_9 7195 9222 + 3.A.1.5.29
pfam HRGMv2_0812_12 HRGMv2_0812_12_10 9316 10311 + URO-D
NULL(UNKNOWN) HRGMv2_0812_12 HRGMv2_0812_12_11 10515 10703 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0812_12 HRGMv2_0812_12_12 10892 12196 + 2.A.39.1.1
peptidase HRGMv2_0812_12 HRGMv2_0812_12_13 12217 13452 + M38.UNW
pfam HRGMv2_0812_12 HRGMv2_0812_12_14 13527 14618 - Metallophos
CAZyme HRGMv2_0812_12 HRGMv2_0812_12_15 14802 15818 + GT2
CAZyme HRGMv2_0812_12 HRGMv2_0812_12_16 15846 16925 + GT2
CAZyme HRGMv2_0812_12 HRGMv2_0812_12_17 16922 17953 + GT2
TC HRGMv2_0812_12 HRGMv2_0812_12_18 18096 18869 + 3.A.1.103.6
TC HRGMv2_0812_12 HRGMv2_0812_12_19 18890 19636 + 3.A.1.103.1
CAZyme HRGMv2_0812_12 HRGMv2_0812_12_20 19666 20679 + GT2
CAZyme HRGMv2_0812_12 HRGMv2_0812_12_21 20704 22791 + GT2
Gene ID: HRGMv2_0812_12_9
Type: TC
Location: 7195 - 9222 (+)
Gene ID: HRGMv2_0812_12_10
Type: pfam
Location: 9316 - 10311 (+)
Gene ID: HRGMv2_0812_12_11
Type:
Location: 10515 - 10703 (+)
Gene ID: HRGMv2_0812_12_12
Type: TC
Location: 10892 - 12196 (+)
Gene ID: HRGMv2_0812_12_13
Type: peptidase
Location: 12217 - 13452 (+)
Gene ID: HRGMv2_0812_12_14
Type: pfam
Location: 13527 - 14618 (-)
Gene ID: HRGMv2_0812_12_15
Type: CAZyme
Location: 14802 - 15818 (+)
Gene ID: HRGMv2_0812_12_16
Type: CAZyme
Location: 15846 - 16925 (+)
Gene ID: HRGMv2_0812_12_17
Type: CAZyme
Location: 16922 - 17953 (+)
Gene ID: HRGMv2_0812_12_18
Type: TC
Location: 18096 - 18869 (+)
Gene ID: HRGMv2_0812_12_19
Type: TC
Location: 18890 - 19636 (+)
Gene ID: HRGMv2_0812_12_20
Type: CAZyme
Location: 19666 - 20679 (+)
Gene ID: HRGMv2_0812_12_21
Type: CAZyme
Location: 20704 - 22791 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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