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Cluster: HRGMv2_0812_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0812_10 HRGMv2_0812_10_6 6993 8330 + 9.B.10.1.1
STP HRGMv2_0812_10 HRGMv2_0812_10_7 8509 9204 + TetR_N
NULL(UNKNOWN) HRGMv2_0812_10 HRGMv2_0812_10_8 9220 11076 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0812_10 HRGMv2_0812_10_9 11255 13264 + 3.A.1.5.12
pfam HRGMv2_0812_10 HRGMv2_0812_10_10 13391 13672 + DUF1294
pfam HRGMv2_0812_10 HRGMv2_0812_10_11 13672 14406 + TauE
CAZyme HRGMv2_0812_10 HRGMv2_0812_10_12 14432 15676 + GH27
TC HRGMv2_0812_10 HRGMv2_0812_10_13 15761 17635 - 9.B.18.2.1
Gene ID: HRGMv2_0812_10_6
Type: TC
Location: 6993 - 8330 (+)
Gene ID: HRGMv2_0812_10_7
Type: STP
Location: 8509 - 9204 (+)
Gene ID: HRGMv2_0812_10_8
Type:
Location: 9220 - 11076 (+)
Gene ID: HRGMv2_0812_10_9
Type: TC
Location: 11255 - 13264 (+)
Gene ID: HRGMv2_0812_10_10
Type: pfam
Location: 13391 - 13672 (+)
Gene ID: HRGMv2_0812_10_11
Type: pfam
Location: 13672 - 14406 (+)
Gene ID: HRGMv2_0812_10_12
Type: CAZyme
Location: 14432 - 15676 (+)
Gene ID: HRGMv2_0812_10_13
Type: TC
Location: 15761 - 17635 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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