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Cluster: HRGMv2_0812_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0812_9 HRGMv2_0812_9_12 12726 13757 - 3.A.1.5.29
TC HRGMv2_0812_9 HRGMv2_0812_9_13 13758 14792 - 3.A.1.5.29
TC HRGMv2_0812_9 HRGMv2_0812_9_14 14813 15970 - 3.A.1.5.29
TC HRGMv2_0812_9 HRGMv2_0812_9_15 15967 16968 - 3.A.1.5.29
peptidase HRGMv2_0812_9 HRGMv2_0812_9_16 17452 18249 + S09.UPW
CAZyme HRGMv2_0812_9 HRGMv2_0812_9_17 18250 19056 + CE1
NULL(UNKNOWN) HRGMv2_0812_9 HRGMv2_0812_9_18 19151 19639 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0812_9 HRGMv2_0812_9_19 19850 20260 - Spore_YtfJ
CAZyme HRGMv2_0812_9 HRGMv2_0812_9_20 20884 23310 + GH106
pfam HRGMv2_0812_9 HRGMv2_0812_9_21 23394 23951 + PCMT | MTS | PrmA | Methyltransf_11 | Methyltransf_16 | Methyltransf_18 | Methyltransf_25 | Methyltransf_31
STP HRGMv2_0812_9 HRGMv2_0812_9_22 24161 25699 + HD
CAZyme HRGMv2_0812_9 HRGMv2_0812_9_23 25763 26686 + CE7
Gene ID: HRGMv2_0812_9_12
Type: TC
Location: 12726 - 13757 (-)
Gene ID: HRGMv2_0812_9_13
Type: TC
Location: 13758 - 14792 (-)
Gene ID: HRGMv2_0812_9_14
Type: TC
Location: 14813 - 15970 (-)
Gene ID: HRGMv2_0812_9_15
Type: TC
Location: 15967 - 16968 (-)
Gene ID: HRGMv2_0812_9_16
Type: peptidase
Location: 17452 - 18249 (+)
Gene ID: HRGMv2_0812_9_17
Type: CAZyme
Location: 18250 - 19056 (+)
Gene ID: HRGMv2_0812_9_18
Type:
Location: 19151 - 19639 (+)
Gene ID: HRGMv2_0812_9_19
Type: pfam
Location: 19850 - 20260 (-)
Gene ID: HRGMv2_0812_9_20
Type: CAZyme
Location: 20884 - 23310 (+)
Gene ID: HRGMv2_0812_9_21
Type: pfam
Location: 23394 - 23951 (+)
Gene ID: HRGMv2_0812_9_22
Type: STP
Location: 24161 - 25699 (+)
Gene ID: HRGMv2_0812_9_23
Type: CAZyme
Location: 25763 - 26686 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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