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Cluster: HRGMv2_0812_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0812_2 HRGMv2_0812_2_18 21512 22534 - 3.D.6.1.3
TC HRGMv2_0812_2 HRGMv2_0812_2_19 22549 23118 - 3.D.6.1.2
TC HRGMv2_0812_2 HRGMv2_0812_2_20 23115 23723 - 3.D.6.1.2
pfam HRGMv2_0812_2 HRGMv2_0812_2_21 23720 24256 - FMN_bind
TC HRGMv2_0812_2 HRGMv2_0812_2_22 24241 25188 - 3.D.6.1.2
TC HRGMv2_0812_2 HRGMv2_0812_2_23 25202 26503 - 3.D.6.1.2
CAZyme HRGMv2_0812_2 HRGMv2_0812_2_24 26667 28526 - GH127
Gene ID: HRGMv2_0812_2_18
Type: TC
Location: 21512 - 22534 (-)
Gene ID: HRGMv2_0812_2_19
Type: TC
Location: 22549 - 23118 (-)
Gene ID: HRGMv2_0812_2_20
Type: TC
Location: 23115 - 23723 (-)
Gene ID: HRGMv2_0812_2_21
Type: pfam
Location: 23720 - 24256 (-)
Gene ID: HRGMv2_0812_2_22
Type: TC
Location: 24241 - 25188 (-)
Gene ID: HRGMv2_0812_2_23
Type: TC
Location: 25202 - 26503 (-)
Gene ID: HRGMv2_0812_2_24
Type: CAZyme
Location: 26667 - 28526 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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