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Cluster: HRGMv2_0812_CGC27

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0812_78 HRGMv2_0812_78_2 936 2939 - GH120
pfam HRGMv2_0812_78 HRGMv2_0812_78_3 3011 3898 - AP_endonuc_2
CAZyme HRGMv2_0812_78 HRGMv2_0812_78_4 3950 5149 - GH109
NULL(UNKNOWN) HRGMv2_0812_78 HRGMv2_0812_78_5 5169 5528 - NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_0812_78 HRGMv2_0812_78_6 5515 5910 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0812_78 HRGMv2_0812_78_7 5935 6954 - 3.A.1.5.29
TC HRGMv2_0812_78 HRGMv2_0812_78_8 6980 8008 - 3.A.1.5.29
TC HRGMv2_0812_78 HRGMv2_0812_78_9 8022 9164 - 3.A.1.5.29
TC HRGMv2_0812_78 HRGMv2_0812_78_10 9165 10166 - 3.A.1.5.29
TC HRGMv2_0812_78 HRGMv2_0812_78_11 10266 11534 - 3.A.1.5.12
Gene ID: HRGMv2_0812_78_2
Type: CAZyme
Location: 936 - 2939 (-)
Gene ID: HRGMv2_0812_78_3
Type: pfam
Location: 3011 - 3898 (-)
Gene ID: HRGMv2_0812_78_4
Type: CAZyme
Location: 3950 - 5149 (-)
Gene ID: HRGMv2_0812_78_5
Type:
Location: 5169 - 5528 (-)
Gene ID: HRGMv2_0812_78_6
Type:
Location: 5515 - 5910 (-)
Gene ID: HRGMv2_0812_78_7
Type: TC
Location: 5935 - 6954 (-)
Gene ID: HRGMv2_0812_78_8
Type: TC
Location: 6980 - 8008 (-)
Gene ID: HRGMv2_0812_78_9
Type: TC
Location: 8022 - 9164 (-)
Gene ID: HRGMv2_0812_78_10
Type: TC
Location: 9165 - 10166 (-)
Gene ID: HRGMv2_0812_78_11
Type: TC
Location: 10266 - 11534 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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