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Cluster: HRGMv2_0812_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0812_47 HRGMv2_0812_47_5 3312 4052 - 3.A.1.3.20
NULL(UNKNOWN) HRGMv2_0812_47 HRGMv2_0812_47_6 4049 4258 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0812_47 HRGMv2_0812_47_7 4286 4903 - 3.A.1.3.20
TC HRGMv2_0812_47 HRGMv2_0812_47_8 4934 5761 - 3.A.1.3.20
CAZyme HRGMv2_0812_47 HRGMv2_0812_47_9 6225 7946 + PL37
TC HRGMv2_0812_47 HRGMv2_0812_47_10 8013 8750 - 9.B.198.1.4
NULL(UNKNOWN) HRGMv2_0812_47 HRGMv2_0812_47_11 8895 9140 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0812_47 HRGMv2_0812_47_12 9386 10792 + 2.A.66.1.43
Gene ID: HRGMv2_0812_47_5
Type: TC
Location: 3312 - 4052 (-)
Gene ID: HRGMv2_0812_47_6
Type:
Location: 4049 - 4258 (-)
Gene ID: HRGMv2_0812_47_7
Type: TC
Location: 4286 - 4903 (-)
Gene ID: HRGMv2_0812_47_8
Type: TC
Location: 4934 - 5761 (-)
Gene ID: HRGMv2_0812_47_9
Type: CAZyme
Location: 6225 - 7946 (+)
Gene ID: HRGMv2_0812_47_10
Type: TC
Location: 8013 - 8750 (-)
Gene ID: HRGMv2_0812_47_11
Type:
Location: 8895 - 9140 (+)
Gene ID: HRGMv2_0812_47_12
Type: TC
Location: 9386 - 10792 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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