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Cluster: HRGMv2_0812_CGC15

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0812_27 HRGMv2_0812_27_1 160 1482 - GH4
CAZyme HRGMv2_0812_27 HRGMv2_0812_27_2 1624 2775 + GH171
CAZyme HRGMv2_0812_27 HRGMv2_0812_27_3 2792 3835 + GH33
TC HRGMv2_0812_27 HRGMv2_0812_27_4 3832 4197 + 1.E.14.1.17
TC HRGMv2_0812_27 HRGMv2_0812_27_5 4194 4889 + 2.A.122.1.6
NULL(UNKNOWN) HRGMv2_0812_27 HRGMv2_0812_27_6 4956 5858 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0812_27 HRGMv2_0812_27_7 5930 7021 - GH179
TC HRGMv2_0812_27 HRGMv2_0812_27_8 7137 8306 + 2.A.4.7.4
Gene ID: HRGMv2_0812_27_1
Type: CAZyme
Location: 160 - 1482 (-)
Gene ID: HRGMv2_0812_27_2
Type: CAZyme
Location: 1624 - 2775 (+)
Gene ID: HRGMv2_0812_27_3
Type: CAZyme
Location: 2792 - 3835 (+)
Gene ID: HRGMv2_0812_27_4
Type: TC
Location: 3832 - 4197 (+)
Gene ID: HRGMv2_0812_27_5
Type: TC
Location: 4194 - 4889 (+)
Gene ID: HRGMv2_0812_27_6
Type:
Location: 4956 - 5858 (+)
Gene ID: HRGMv2_0812_27_7
Type: CAZyme
Location: 5930 - 7021 (-)
Gene ID: HRGMv2_0812_27_8
Type: TC
Location: 7137 - 8306 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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