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Cluster: HRGMv2_0812_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0812_24 HRGMv2_0812_24_1 338 3046 + GH106
TC HRGMv2_0812_24 HRGMv2_0812_24_2 3103 3429 - 2.A.78.1.1
TC HRGMv2_0812_24 HRGMv2_0812_24_3 3426 4052 - 2.A.78.1.1
pfam HRGMv2_0812_24 HRGMv2_0812_24_4 4436 5965 - FGGY_N | FGGY_C
TC HRGMv2_0812_24 HRGMv2_0812_24_5 5987 6637 - 9.B.31.1.2
pfam HRGMv2_0812_24 HRGMv2_0812_24_6 6650 7978 - GTP_EFTU | GTP_EFTU | MMR_HSR1 | MMR_HSR1 | FeoB_N | FeoB_N | AIG1 | KH_dom-like
pfam HRGMv2_0812_24 HRGMv2_0812_24_7 7980 9293 - DUF512 | PDZ_6 | Radical_SAM_2
TC HRGMv2_0812_24 HRGMv2_0812_24_8 10028 11395 + 2.A.26.1.3
TC HRGMv2_0812_24 HRGMv2_0812_24_9 11504 12550 + 2.A.98.1.4
CAZyme HRGMv2_0812_24 HRGMv2_0812_24_10 12594 14570 - GH42
Gene ID: HRGMv2_0812_24_1
Type: CAZyme
Location: 338 - 3046 (+)
Gene ID: HRGMv2_0812_24_2
Type: TC
Location: 3103 - 3429 (-)
Gene ID: HRGMv2_0812_24_3
Type: TC
Location: 3426 - 4052 (-)
Gene ID: HRGMv2_0812_24_4
Type: pfam
Location: 4436 - 5965 (-)
Gene ID: HRGMv2_0812_24_5
Type: TC
Location: 5987 - 6637 (-)
Gene ID: HRGMv2_0812_24_6
Type: pfam
Location: 6650 - 7978 (-)
Gene ID: HRGMv2_0812_24_7
Type: pfam
Location: 7980 - 9293 (-)
Gene ID: HRGMv2_0812_24_8
Type: TC
Location: 10028 - 11395 (+)
Gene ID: HRGMv2_0812_24_9
Type: TC
Location: 11504 - 12550 (+)
Gene ID: HRGMv2_0812_24_10
Type: CAZyme
Location: 12594 - 14570 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0812_24_9 vegetarian > vegan 2.07546 0.00038

🧭 Explore Read Mapping of CGC

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