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Cluster: HRGMv2_0811_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0811_2 HRGMv2_0811_2_146 158716 160842 + GH36
TC HRGMv2_0811_2 HRGMv2_0811_2_147 160871 161818 + 3.A.1.1.10
TC HRGMv2_0811_2 HRGMv2_0811_2_148 161840 162727 + 3.A.1.1.29
STP HRGMv2_0811_2 HRGMv2_0811_2_149 162826 164445 + SBP_bac_1
pfam HRGMv2_0811_2 HRGMv2_0811_2_150 164887 165897 + Peripla_BP_4
TC HRGMv2_0811_2 HRGMv2_0811_2_151 166027 167565 + 3.A.1.2.19
TC HRGMv2_0811_2 HRGMv2_0811_2_152 167586 168578 + 3.A.1.2.18
TC HRGMv2_0811_2 HRGMv2_0811_2_153 168591 169580 + 3.A.1.2.19
Gene ID: HRGMv2_0811_2_146
Type: CAZyme
Location: 158716 - 160842 (+)
Gene ID: HRGMv2_0811_2_147
Type: TC
Location: 160871 - 161818 (+)
Gene ID: HRGMv2_0811_2_148
Type: TC
Location: 161840 - 162727 (+)
Gene ID: HRGMv2_0811_2_149
Type: STP
Location: 162826 - 164445 (+)
Gene ID: HRGMv2_0811_2_150
Type: pfam
Location: 164887 - 165897 (+)
Gene ID: HRGMv2_0811_2_151
Type: TC
Location: 166027 - 167565 (+)
Gene ID: HRGMv2_0811_2_152
Type: TC
Location: 167586 - 168578 (+)
Gene ID: HRGMv2_0811_2_153
Type: TC
Location: 168591 - 169580 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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