Cluster: HRGMv2_0811_CGC29
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0811
- CGC Family ID: CGCFAM_06025
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0811_35 | HRGMv2_0811_35_13 | 14432 | 15370 | + | 3.A.1.1.10 |
| TC | HRGMv2_0811_35 | HRGMv2_0811_35_14 | 15389 | 16270 | + | 3.A.1.1.29 |
| NULL(UNKNOWN) | HRGMv2_0811_35 | HRGMv2_0811_35_15 | 16317 | 17984 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0811_35 | HRGMv2_0811_35_16 | 18051 | 18878 | + | Exo_endo_phos |
| CAZyme | HRGMv2_0811_35 | HRGMv2_0811_35_17 | 18892 | 19581 | + | CE4 |
Gene ID: HRGMv2_0811_35_13
Type: TC
Location: 14432 - 15370 (+)
Type: TC
Location: 14432 - 15370 (+)
Gene ID: HRGMv2_0811_35_14
Type: TC
Location: 15389 - 16270 (+)
Type: TC
Location: 15389 - 16270 (+)
Gene ID: HRGMv2_0811_35_15
Type:
Location: 16317 - 17984 (+)
Type:
Location: 16317 - 17984 (+)
Gene ID: HRGMv2_0811_35_16
Type: pfam
Location: 18051 - 18878 (+)
Type: pfam
Location: 18051 - 18878 (+)
Gene ID: HRGMv2_0811_35_17
Type: CAZyme
Location: 18892 - 19581 (+)
Type: CAZyme
Location: 18892 - 19581 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Christensenellales
Family
Aristaeellaceae
Genus
Faecivicinus
Species
Faecivicinus sp900759005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_0811_35_13 | vegetarian > vegan | 2.06075 | 0.04886 |
| HRGMv2_0811_35_16 | vegan > omnivore | 3.27225 | 0.00566 |
| HRGMv2_0811_35_17 | vegan > omnivore | 1.68153 | 0.00566 |